align check code

build/generate_filelist_xml.php

@@ -157,8 +157,9 @@ $iterator1 = new RecursiveIteratorIterator($dir_iterator1);
 // Need to ignore document custom etc. Note: this also ignore natively symbolic links.
 $files = new RegexIterator($iterator1, '#^(?:[A-Z]:)?(?:/(?!(?:'.($includecustom?'':'custom\/|').'documents\/|conf\/|install\/))[^/]+)+/[^/]+\.(?:php|css|html|js|json|tpl|jpg|png|gif|sql|lang)$#i');
 */
-$regextoinclude='\.(php|php3|php4|php5|phtml|phps|phar|inc|css|scss|html|xml|js|json|tpl|jpg|jpeg|png|gif|ico|sql|lang|txt|yml|md|mp3|mp4|wav|mkv|z|gz|zip|rar|tar|less|svg|eot|woff|woff2|ttf|manifest)$';
-$regextoexclude='('.($includecustom?'':'custom|').'documents|conf|install|dejavu-fonts-ttf-.*|public\/test|sabre\/sabre\/.*\/tests|Shared\/PCLZip|nusoap\/lib\/Mail|php\/example|php\/test|geoip\/sample.*\.php|ckeditor\/samples|ckeditor\/adapters)$';  // Exclude dirs
+// Define qualified files (must be same than into generate_filelist_xml.php and in api_setup.class.php)
+$regextoinclude = '\.(php|php3|php4|php5|phtml|phps|phar|inc|css|scss|html|xml|js|json|tpl|jpg|jpeg|png|gif|ico|sql|lang|txt|yml|bak|md|mp3|mp4|wav|mkv|z|gz|zip|rar|tar|less|svg|eot|woff|woff2|ttf|manifest)$';
+$regextoexclude = '('.($includecustom?'':'custom|').'documents|conf|install|dejavu-fonts-ttf-.*|public\/test|sabre\/sabre\/.*\/tests|Shared\/PCLZip|nusoap\/lib\/Mail|php\/example|php\/test|geoip\/sample.*\.php|ckeditor\/samples|ckeditor\/adapters)$';  // Exclude dirs
 $files = dol_dir_list(DOL_DOCUMENT_ROOT, 'files', 1, $regextoinclude, $regextoexclude, 'fullname');
 
 $dir='';

htdocs/admin/system/filecheck.php

@@ -226,9 +226,9 @@ if (!$error && $xml) {
 		//var_dump($xml->dolibarr_htdocs_dir[0]['includecustom']);exit;
 		$includecustom = (empty($xml->dolibarr_htdocs_dir[0]['includecustom']) ? 0 : $xml->dolibarr_htdocs_dir[0]['includecustom']);
 
-		// Defined qualified files (must be same than into generate_filelist_xml.php)
-		$regextoinclude = '\.(php|php3|php4|php5|phtml|phps|phar|inc|css|scss|html|xml|js|json|tpl|jpg|jpeg|png|gif|ico|sql|lang|txt|yml|md|mp3|mp4|wav|mkv|z|gz|zip|rar|tar|less|svg|eot|woff|woff2|ttf|manifest)$';
-		$regextoexclude = '('.($includecustom ? '' : 'custom|').'documents|conf|install|public\/test|Shared\/PCLZip|nusoap\/lib\/Mail|php\/example|php\/test|geoip\/sample.*\.php|ckeditor\/samples|ckeditor\/adapters)$'; // Exclude dirs
+		// Define qualified files (must be same than into generate_filelist_xml.php and in api_setup.class.php)
+		$regextoinclude = '\.(php|php3|php4|php5|phtml|phps|phar|inc|css|scss|html|xml|js|json|tpl|jpg|jpeg|png|gif|ico|sql|lang|txt|yml|bak|md|mp3|mp4|wav|mkv|z|gz|zip|rar|tar|less|svg|eot|woff|woff2|ttf|manifest)$';
+		$regextoexclude = '('.($includecustom ? '' : 'custom|').'documents|conf|install|dejavu-fonts-ttf-.*|public\/test|sabre\/sabre\/.*\/tests|Shared\/PCLZip|nusoap\/lib\/Mail|php\/example|php\/test|geoip\/sample.*\.php|ckeditor\/samples|ckeditor\/adapters)$'; // Exclude dirs
 		$scanfiles = dol_dir_list(DOL_DOCUMENT_ROOT, 'files', 1, $regextoinclude, $regextoexclude);
 
 		// Fill file_list with files in signature, new files, modified files

htdocs/api/class/api_setup.class.php

@@ -1744,9 +1744,9 @@ class Setup extends DolibarrApi
 			if (is_object($xml->dolibarr_htdocs_dir[0])) {
 				$includecustom = (empty($xml->dolibarr_htdocs_dir[0]['includecustom']) ? 0 : $xml->dolibarr_htdocs_dir[0]['includecustom']);
 
-				// Defined qualified files (must be same than into generate_filelist_xml.php)
+				// Define qualified files (must be same than into generate_filelist_xml.php and in api_setup.class.php)
 				$regextoinclude = '\.(php|php3|php4|php5|phtml|phps|phar|inc|css|scss|html|xml|js|json|tpl|jpg|jpeg|png|gif|ico|sql|lang|txt|yml|bak|md|mp3|mp4|wav|mkv|z|gz|zip|rar|tar|less|svg|eot|woff|woff2|ttf|manifest)$';
-				$regextoexclude = '('.($includecustom ? '' : 'custom|').'documents|conf|install|public\/test|Shared\/PCLZip|nusoap\/lib\/Mail|php\/example|php\/test|geoip\/sample.*\.php|ckeditor\/samples|ckeditor\/adapters)$'; // Exclude dirs
+				$regextoexclude = '('.($includecustom ? '' : 'custom|').'documents|conf|install|dejavu-fonts-ttf-.*|public\/test|sabre\/sabre\/.*\/tests|Shared\/PCLZip|nusoap\/lib\/Mail|php\/example|php\/test|geoip\/sample.*\.php|ckeditor\/samples|ckeditor\/adapters)$'; // Exclude dirs
 				$scanfiles = dol_dir_list(DOL_DOCUMENT_ROOT, 'files', 1, $regextoinclude, $regextoexclude);
 
 				// Fill file_list with files in signature, new files, modified files